Table of Contents
Bio 101: Genomics & Computational Biology
Net2: Last week's take home lessons
Net3: Today's story & goals Bio101 5-Dec-2000
Faster than exponential
The human neural net
Olfactory integration: glomeruli
Basic olfactory tasks
Odor space and olfactory processing: Collective algorithms & neural implementation
Olfaction code
Systems biology model sharing
Net3: Today's story & goals Bio101 5-Dec-2000
Design and strategy for the Cardiome Project
Modeling SNP to 3D to cell morphology & pathology
Red Blood Cell Function
3D-structure to function to morphology to function
From SNPs to pathogen resistance mechanisms
From SNPs to toxicology mechanisms
PPT Slide
A possible molecular mechanism governing human erythrocyte shape.
Red cell distortion and conceptual basis of diffusing capacity estimates: finite element analysis
Action Potential Model for Canine Ventricular Cell
Canine Ventricular Simulations
Whole body recirculation model with four chambered heart, seven organs, four arteries and four veins
Net3: Today's story & goals Bio101 5-Dec-2000
The Sims:
Integration of multiple inputs: Think globally; act locally:
Think globally; act locally
Facts of Life 101
HIV-1 resequencing
Resistance to HIV-1: allele association
HIV-1 resistance to reverse transcriptase targeted drugs
Vaccines for the 21st Century
Growth & decay
HIV-AIDS models
HIV treatement model parameters
Crossing the Hopf bifurcation in a live predator-prey system.
Predator -- prey
Human microbial ecology: Sorting out cause, effect & prescription (vaccine paradox)
Net3: Today's story & goals Bio101 5-Dec-2000
Human Genome Project Ethical, Legal & Social Issues (ELSI)
Human Genome Project Ethical, Legal & Social Issues (ELSI)
ELSI: Do Races Differ? Not Really, DNA Shows
a-ab-an-anti-de-dis-in-neg-non-pseudo-un-scientific
Biowarfare
Genetically modified organisms (GMO)
Genetically modified organisms
Cloning & stem cells
Net3: Today's story & goals Bio101 5-Dec-2000
Models for education & decision-making
Measures of quality of structural & functional genomic data
Compu-bio-physico-physio- eco-econo-aesthetico- edu-journalismetrics
Systems biology model sharing
101 after '01
Multi-thanks to
Teaching Fellows 2001
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