Biophysics 101 Genomics and Computational Biology
Net2: Last week's take home lessons
Net3: Today's story & goals Bio101 5-Dec-2000
Integration of multiple inputs: Think globally; act locally:
The Sims
Systems biology model sharing
Signaling PAthway Database SPAD
Olfactory integration: glomeruli
1) Odor memory and recognition. 2) Background elimination (one known + unknown thoroughly mixed) 3) Component separation. (few known odors mixed) 4) Odor separation (turbulent unknowns)
Odor space and olfactory processing: Collective algorithms & neural implementation
Design and strategy for the Cardiome Project
Modeling SNP to 3D to cell morphology & pathology
Red cell distortion and conceptual basis of diffusing capacity estimates: finite element analysis
Action Potential Model for Canine Ventricular Cell
Canine Ventricular Simulations
Whole body recirculation model with four chambered heart, seven organs, four arteries and four veins
Facts of Life 101
HIV-1 resequencing
One form of HIV-1 Resistance
An association test for CCR-5 & HIV resistance
Covalently trapped catalytic complex of HIV-1 reverse transcriptase: implications for drug resistance
Vaccines for the 21st Century
Rorschach Test
Growth & decay
HIV-AIDS models
HIV treatement model parameters
Crossing the Hopf bifurcation in a live predator-prey system.
Predator -- prey
Human microbial ecology: Sorting out cause, effect & prescription (vaccine paradox)
Think globally; act locally
Human Genome Project Ethical, Legal & Social Issues (ELSI)
ELSI: Do Races Differ? Not Really, DNA Shows
a-ab-an-anti-de-dis-in-neg-non-pseudo-un-scientific
Biowarfare
Genetically modified organisms (GMO)
GMO
Models for education & decision-making
Measures of quality of structural & functional genomic data
Compu-bio-physico-physio- eco-econo-aesthetico- edu-journalismetrics
101 in '01
Multi-thanks to
Teaching Fellows 2000
Committee on Undergraduate Education (CUE) & Division of Continuing Education (DCE) Evaluations
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