tables/sp_table.h

#ifndef _SP_TABLE_H_
#define _SP_TABLE_H_

enum {SP_TABLE_FIRST_PEPTIDE, SP_TABLE_SECOND_PEPTIDE};

typedef struct 
{ 
        Experiment* expnt;
        int no_rows;
        int sizeOfRow;
        SP_ROW* rows;  //  An array of rows each representing a spectrum
        int RANK_THRESHOLD;
        int SCORE_THRESHOLD;    

} SP_TABLE; 


int                     SPTable_loadFile(SP_TABLE* T, char* filename);
MQString*       SPTable_toStringArray(SP_TABLE T, int field);

int                     SPTable_create(SP_TABLE* T, int size);
int                     SPTable_createWithMSLimits(SP_TABLE* T, int size, float rt_low, float rt_high);

//void createSpectrumToPeptideTableFromSpectrum (SP_TABLE* T, SpectrumHeader* SH);
//void addPeptideToSpectrum(SP_TABLE* T, int specIndex, Peptide* pt, Score score);

void            SPTable_fprint(FILE* fp, SP_TABLE* T, int size); 

#endif

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