massspec/deconvolve.h File Reference

a file that includes the definitions for the functions used in deconvolution More...

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Data Structures
struct	Deconvolver
Defines
#define	DECONVOLVER_LOWER_BOUND   1
#define	DECONVOLVER_UPPER_BOUND   2
#define	MQ_DECONVOLVING_STRING   "---------------- DECONVOLVING PEAKGROUP ------------------\n"
Enumerations
enum	{ DECONVOLVER_MOZ, DECONVOLVER_MZJ }
Functions
void	Deconvolver_fprintMOZBounds (FILE *fp)
int	Deconvolver_init (int mode)
void	Deconvolver_release ()
int	Deconvolver_loadMOZBounds ()
int	Deconvolver_findBestCarbonFitIteratively (float *array, int size, int c_begin, int c_end, int *min_carb, float *score, int *mip)
int	Deconvolver_guessCarbonContent (float *array, int size, int c_begin, int c_end, float *score)
int	FPeak2iArray_deconvolveCharge (FPeak2i *pArray, int nArray, IsotopicCluster *clusters, int *nClusters)
int	PeakGroup_deconvolveCharge (PeakGroup *peak_group)
int **	FPeak2iPointerArray_createAdjacencyMatrixByMZJ (FPeak2iPointer *pVertexArray, int nVertexArraySize)
float **	FPeak2iPointerArray_createAdjacencyMatrixByMOZ (FPeak2iPointer *pVertexArray, int nVertexArraySize)
int **	FPeak2iArray_createAdjacencyMatrixByMZJ (FPeak2i *pVertexArray, int nVertexArraySize)
float **	FPeak2iArray_createAdjacencyMatrixByMOZ (FPeak2i *pVertexArray, int nVertexArraySize)
int **	IntArray_createAdjacencyMatrix (int *pVertexArray, int nVertexArraySize)
int	IsotopicCluster_findBestCarbonFit (IsotopicCluster *ic)
int	IsotopicCluster_findBestCarbonFitUsingResidualArray (IsotopicCluster *ic, float *res)
FPeak2i	FPeak2i_createUsingIsotopicCluster (IsotopicCluster *ic, int nCurve)
void	FPeak2iArray_fillUsingIsotopicCluster (FPeak2i *pArray, int *nLastIndex, IsotopicCluster *ic, int nCurve)
int	PeakGroup_deconvolveIsotopes (PeakGroup *peakgroup, Map2D *pMap, FPeak2i *pFPeaksOut, int nFPeaksOut, char *szCurve)
int	PeakGroup_deconvolveIsotopes2 (PeakGroup *peakgroup, Map2D *pMap, FPeak2i *pFPeaksOut, int nFPeaksOut, char *szCurve)
int	PeakGroup_deconvolveIsotopes3 (PeakGroup *peakgroup, Map2D *pMap, FPeak2i *pFPeaksOut, int nFPeaksOut, char *szCurve)
int	PeakGroup_deconvolveIsotopes3_1 (PeakGroup *peakgroup, Map2D *pMap, FPeak2i *pFPeaksOut, int nFPeaksOut)
int	PeakGroup_deconvolveIsotopesWithoutFitting (PeakGroup *peakgroup)
int	PeakGroup_deconvolveIsotopes5 (PeakGroup *peakgroup, Map2D *pMap, FPeak2i *pFPeaksOut, int nFPeaksOut, char *szCurve)
Variables
int	MAX_NO_CLUSTERS
Byte	DECONVOLVER_VERBOSE
Byte	DECONVOLVER_BOUNDS_LOADED
int	DECONVOLVER_MODE
int	NO_CHARGES
int **	mzjBounds
float **	mozBounds

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Detailed Description

a file that includes the definitions for the functions used in deconvolution

Author:

Kyriacos C. Leptos

Date:

2004-05-04

Details.

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