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massspec/mqaminoacid.h File Reference

a file that includes the definitions for the functions used for amino-acid residues More...

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Data Structures

struct  Element
struct  HMODEL
struct  IonizationInfo
struct  Aminoacid

Defines

#define NO_OF_ELEMENTS   5
#define NO_OF_AMINOACIDS   20
#define NO_HYDROPHOBICITY_MODELS   4

Typedefs

typedef HMODEL HydrophobicityModel
typedef IonizationInfo IonizationInfo
typedef Aminoacid Aminoacid

Enumerations

enum  {
  GLY, ALA, SER, PRO,
  VAL, THR, CYS, ILE,
  LEU, ASN, ASP, HIS,
  GLN, LYS, GLU, MET,
  PHE, ARG, TYR, TRP
}

Functions

int Aminoacid_charToIndex (char aa)
char Aminoacid_indexToChar (int index)
float Aminoacid_calcMW (int i)
float Aminoacid_calcAbsoluteMW (int i)
void Aminoacid_fprintDelimited (FILE *fp, char delimiter)
float _calcMWFromMZ (float mz, int charge)

Variables

int CURR_HMODEL
Aminoacid aminoacid [NO_OF_AMINOACIDS]

Detailed Description

a file that includes the definitions for the functions used for amino-acid residues

Author:
Kyriacos C. Leptos
Date:
2004-05-04
Details.
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