MapQuant: massspec/openrawfile.h Source File

00001 #ifndef _OPENRAW_FILE_H_ 00002 #define _OPENRAW_FILE_H_ 00003 00004 /* Copyright (c) Kyriacos Leptos and the President and Fellows of Harvard University 00005 Release Date: 2004-11-01 00006 Part of the MapQuant suite library "massspec.lib" 00007 */ 00008 00009 #define OPENRAW_MS1_FOLDER "MS1" 00010 #define OPENRAW_MS2_FOLDER "MS2" 00011 #define OPENRAW_PARAM_FOLDER "PARAM" 00012 00013 #define OPENRAW_GLOBAL_RT_SAMPLING_ARRAY_FILENAME "RTSA.param" 00014 #define OPENRAW_GLOBAL_MS_SAMPLING_ARRAY_FILENAME "MSSA.param" 00015 #define OPENRAW_EXPERIMENT_SIZE_FILENAME "Size.param" 00016 #define OPENRAW_INSTRUMENT_METHOD_FILENAME "InstrumentMethod.param" 00017 00018 struct OpenRawFile 00019 { 00020 char* szName; 00021 00022 char* szRawExpDir; 00023 // Open Raw Specific Folders 00024 char* szMS1Dir; 00025 char* szMS2Dir; 00026 char* szParamDir; 00027 }; 00028 00029 typedef struct OpenRawFile OpenRawFile; 00030 00031 int OpenRawFile_doesMSArchiveExist(OpenRawFile* orFile); 00032 float OpenRawFile_getVersionOfMSArchive(OpenRawFile* orFile); 00033 int OpenRawFile_getTypeOfMSArchive(OpenRawFile* orFile); 00034 int OpenRawFile_mergeMSSubArchive(OpenRawFile* orFile); 00035 00036 void OpenRawFile_removeMSArchiveIndexFile(OpenRawFile* orFile); 00037 void OpenRawFile_getMSSubArchiveRanges(OpenRawFile* orFile, 00038 int** start_scan, int** stop_scan, int* nsubmsar); 00039 00040 float OpenRawFile_getVersionOfMS2Archive(OpenRawFile* orFile); 00041 int OpenRawFile_getTypeOfMS2Archive(OpenRawFile* orFile); 00042 int OpenRawFile_verifyInstrumentMethod(OpenRawFile* orFile); 00043 void OpenRawFile_getRangeOfIndependentScan(OpenRawFile* orFile, double* mass_start, double* mass_stop); 00044 00045 #endif 00046