massspec/fitter.h File Reference

a file that includes the definitions for the functions used in fitting More...

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Data Structures
struct	FitterInput
struct	FitterOutput
struct	MapFitter
Enumerations
enum	{ FITTER_INIT_SIGMA_RT_PARAMETER, FITTER_INIT_SIGMA_MZ_PARAMETER }
Functions
void	Fitter_setParameter (int parameter, float value)
void	Fitter_init (MapFitter *mfitter)
int	Fitter_init_2 (MapFitter *fitter, Map2D *map, int scan, int bin, int charge)
int	Fitter_setInitCondForPeptide (MapFitter *fitter, Map2D *map, int scan, int bin, float charge, int carbons, int curve_index)
void	Fitter_fixParameter (MapFitter *mfitter, int parameter)
void	Fitter_setStateParamArray (MapFitter *mfitter)
void	Fitter_destroy (MapFitter *mfitter)
void	Fitter_fprint (FILE *fp, MapFitter *fitter)
Map2D	Fitter_createFittedMap (MapFitter MFF)
Map2D	Fitter_createFittedMapFromFPeaks (Map2D *pMap, FPeak2i *pFPeaks, int nFPeaks)
Map2D	Fitter_createMapFromFPeaks (Map2D *temp_map, FPeak2i *pFPeaks, int nFPeaks)
float *	Fitter_getInitialConditionsOfUnion (FPeak2i *pIn1, int nIn1, FPeak2i *pIn2, int nIn2, int *nInit)
Peak2i *	Fitter_getPeak2iArrayOfUnion (FPeak2i *pIn1, int nIn1, FPeak2i *pIn2, int nIn2, int *nPeaks)
int *	Fitter_getCurveArrayOfUnion (FPeak2i *pIn1, int nIn1, FPeak2i *pIn2, int nIn2, int *nCurves)
int	Fitter_getInitialConditionsFromPeak2iArray (MapFitter *ftt, Map2D *map, Peak2i *pPeaks, int nPeaks, int curve)
int	Fitter_getInitialConditionsFromFPeak2iArray (MapFitter *ftt, Map2D *map, FPeak2i *pFPeaks, int nPeaks, int curve)
float *	Fitter_getInitialConditionsWithMultipleCurves (MapFitter *fitter)
int	Fitter_fitPeaks (MapFitter *fitter)
int	Fitter_fitPeaksGivenInitialConditions (MapFitter *fitter)
int	Fitter_fitPeaksWithMultipleCurves (MapFitter *fitter)
int	Fitter_fitPeaksGivenInitialConditionsMultipleCurves (MapFitter *fitter)
Variables
int	FITTER_INIT_SIGMA_RT_SET
int	FITTER_INIT_SIGMA_MZ_SET
float	INIT_SIGMA_RT
float	INIT_SIGMA_MZ
int	NR_BD_GAUSSIOID_FIX_CHARGE
int	FITTER_MAX_NO_PEAKS
int	FITTER_MAX_ITERATIONS

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Detailed Description

a file that includes the definitions for the functions used in fitting

Author:

Kyriacos C. Leptos

Date:

2004-05-04

Details.

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