MapQuant: massspec/segment_extractor.h Source File

00001 #ifndef _SEGMENT_EXTRACTOR_H_ 00002 #define _SEGMENT_EXTRACTOR_H_ 00003 00004 /* Copyright (c) Kyriacos Leptos and the President and Fellows of Harvard University 00005 Release Date: 2004-11-01 00006 Part of the MapQuant suite library "massspec.lib" 00007 */ 00008 00009 extern int MAX_NO_PG_FPEAKS; 00010 00011 enum{ TILE_UPPER_SEAM, TILE_LOWER_SEAM}; 00012 00013 enum{ SEGMENT_EXTRACTOR_INCLUDE_ALL, 00014 SEGMENT_EXTRACTOR_EXCLUDE_SEGMENTS_ON_EDGE, 00015 SEGMENT_EXTRACTOR_EXCLUDE_SEGMENTS_ON_UPPER_EDGE, 00016 SEGMENT_EXTRACTOR_EXCLUDE_SEGMENTS_ON_LOWER_EDGE}; 00017 00018 #define MAX_NO_OF_SEGMENTS 1024 00019 00020 typedef struct 00021 { 00022 Map2D* pMapMask; 00023 Map2D* pMapSource; 00024 Attributes* pSegmentAttributes; 00025 int nSegmentAttributes; 00026 int* pSegmentIndex; 00027 int nSegments; 00028 } SegmentExtractorInput; 00029 00030 typedef struct 00031 { 00032 Map2D MapSegment; 00033 } SegmentExtractorOutput; 00034 00035 00036 typedef struct 00037 { 00038 SegmentExtractorInput in; 00039 SegmentExtractorOutput out; 00040 } SegmentExtractor; 00041 00042 00043 void SegmentExtractor_init(SegmentExtractor* SegEx, Map2D* pMapMask, 00044 Map2D* pMapSource, 00045 int* pSegmentIndex, 00046 int nSegemnts); 00047 int SegmentExtractor_extractSingleMap(SegmentExtractor* segex); 00048 int SegmentExtractor_extractSingleMapByLabel(Map2D* mask, Map2D* source, Map2D* dest, Attributes attr); 00049 int SegmentExtractor_extractNonZeroLabels(Map2D* dest, Map2D* source, Map2D* mask); 00050 00051 int SegmentExtractor_extractMultipleMaps(SegmentExtractor* SegEx); 00052 int SegmentExtractor_extractMultipleMapsByLabel(Map2D* mask, Map2D* source, Map2D* dest, Attributes* attr, int* pSegmentIndices, int nSegments); 00053 00054 int* SegmentExtractor_getSegmentsOnEdge(Map2D* map, int direction, int* nSegments); 00055 00056 int SegmentExtractor_extractAreaAndTIC(Map2D* mask, Map2D* source, Attributes* attr); 00057 int SegmentExtractor_extractStatistics(DescriptiveStatistics* stat, Map2D* mask, Map2D* source, Attributes* attr); 00058 int SegmentExtractor_extractStatisticsFromLabel(DescriptiveStatistics* stat, Map2D* mask, Map2D* source, int label); 00059 #endif 00060