proteome/proteincoverdisplay.h

#ifndef _PROTEINCOVERDISPLAY_H_
#define _PROTEINCOVERDISPLAY_H_

#define MAX_NO_ROWS 40

#define MARKING_CHAR_PLUS_1  '1'
#define MARKING_CHAR_PLUS_2  '2'
#define MARKING_CHAR_PLUS_3  '3'
#define MARKING_CHAR_PLUS_4  '4'

#define MARKING_CHAR_UNKNOWN '?'

#define MARKING_CHAR '-'

extern int CHAR_PER_LINE;

Range2i* ProteinCoverDisplay_createBoundaryArray(ProteinCoverDisplay* pcd, int* nsize);
Range2i* ProteinCoverDisplay_mapPeptides(ProteinCoverDisplay* pcd, int* nmappedpeptides,
                                                                         MQString* peptides, 
                                                                         MQString* charges, 
                                                                         MQString* abundances,
                                                                         int npeptides);
#endif

---