fpeak2i.h

#ifndef _FPEAK_H_
#define _FPEAK_H_

/* Copyright (c) Kyriacos Leptos and the President and Fellows of Harvard University
   Release Date: 2004-11-01
   Part of the MapQuant suite library "massspec.lib" 
*/

struct FPeak2i
{
    unsigned isValid    : 1;
    unsigned nStatus    : 3;

    int     rt_i;
    int     mz_j;
    float*  param;
};

typedef struct FPeak2i FPeak2i;

// ***************************************************
// *************** FPeak2i Functions *****************
// ***************************************************

FPeak2i  FPeak2i_create(int scan, int bin, float* param);
void     FPeak2i_destroy(FPeak2i* peak);
FPeak2i* FPeak2i_new();

void        FPeak2i_fprint  (FILE* fp, FPeak2i* fpeak);
void        FPeak2i_fprintln(FILE* fp, FPeak2i fpeak);

void        FPeak2i_fprintWithCurve(FILE* fp, FPeak2i fpeak);
void        FPeak2i_fprintlnWithCurve(FILE* fp, FPeak2i fpeak);

char*       FPeak2i_toString(FPeak2i* fpeak);
FPeak2i     FPeak2i_cpyFPeak2i(FPeak2i aa);
void        FPeak2i_copy(FPeak2i* fpk, FPeak2i* aa);

// ################# Get Functions #####################
Peak2i  FPeak2i_getPeak2i(FPeak2i peak);
Peak2i  FPeak2i_getPeak2iFitted(FPeak2i* peak, MQExperiment* expmnt);

Peak2f  FPeak2i_getPeak2f(FPeak2i peak);
float   FPeak2i_getMZ(FPeak2i* peak);
float   FPeak2i_getRT(FPeak2i* peak);
float   FPeak2i_getZ(FPeak2i* peak);
float   FPeak2i_hasZ(FPeak2i* peak);
float   FPeak2i_getParam(FPeak2i* peak, int params);
void    FPeak2i_setParam(FPeak2i* peak, int params, float value);

void    FPeak2i_filterCurveWithZ(FPeak2i* fpeak);

float   FPeak2i_getRealValueDeviation(FPeak2i* fpk, MQExperiment* expmnt, int dimension);
int     FPeak2i_getDiscreteValueDeviation(FPeak2i* fpk, MQExperiment* expmnt, int dimension);

int     FPeak2i_areParametersPositive(FPeak2i fpeak);

int     FPeak2i_cmpBySamplingCoordinates(const void *p1, const void *p2);
int     FPeak2i_cmpByAbundance(const void *p1, const void *p2);
int     FPeak2i_cmpByMZJ(const void *p1, const void *p2);
int     FPeak2i_cmpByMOZ(const void *p1, const void *p2);

void    FPeak2i_fprintCommaDelimited(FILE* fp, FPeak2i* peak);

#endif

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