Table 2 Novel Open Reading Frames

ORF#	Access	Spe	Len	Poisson	Spe	Match
1	X03774	Hal	 59W	13.64	Eco	Plasmid R1 protein Hok
2	X63837	Hsa	116C	13.08	Hha	putative bactio-opsin activator
3	M34778	Mfe	 85C*	16.70	Bla	threonine synthase
4	M26976	Mfe	 46C	 9.72	Bsu	hisC homolog
5	M84821	Mfo	244W*	19.82	Wsu	formate dehydrogenase D
6	X04021	Mva	 57C	11.02	Mst	y36K (ORF)
7	X02516	Mvo	139N	30.96	Hha	RNA polymerase subunit B`
8	X14818	Sac	187N	27.07	Eco	translation initiation factor 2
9	J05184	Sac	273C*	26.44	Mel	acyl-CoA dehydrogenase
10	X17482	Acy	295W	51.85	Aci	indole-3-glycerol phosphate synthase
11	X17482	Acy	405C	30.02	Bsu	acetolactate synthase, large subunit
12	X54196	Ani	132C	 5.82	Eco	hemolysin D
13	X58847	Ans	 85W	 6.74	Cso	ribosomal protein S1
14	X65511	Ans	 53N	12.92	Eco	nfrC (cytoplasmic protein of unknown function)
15	M20806	Fdi	 55N	28.01	Pan	ORF W
16	X60313	Pho	 65N	18.54	Aqu	ORF in petBD operon
17	X58719	Scp	146W	11.11	Bsu	ysuL (ORF)
18	M99378	Scp	172W	36.48	Cac	ORF
19	X53695	Scp	158C	13.34	Eco	signal transduction protein barA
20	M95289	Scp	 32C	14.08	Scp	orf 3' of cpeB
21	X59809	Scp	 35C	12.47	Scp	orf257
22	X59809	Scp	 45N	24.40	Ssp	ORF 198
23	X15646	Spl	110W	25.55	Avi	ORF
24	S36216	Spl	111W	16.80	Hpa	modification methylase
25	S43783	Spl	110W	69.89	Scp	nitrogen regulatory protein P-II
26	X53839	Svu	 77N	 9.60	Scp	transcriptional repressor smtB
27	S67470	Svu	293N	93.15	Sys	cytochrome oxidase subunit I
28	S69957	Sys	 54C	 7.66	Dno	ATP-dependent protease ClpB
29	M57518	Sys	189N	11.08	Eco	glycine cleavage system protein T
30	S39528	Sys	170N	64.28	Zmo	enolase
31	X62276	Ais	174C	16.60	Aim	homoserine acetyltransferase
32	M11276	Ars	242C*	47.19	Atu	betaglucosidase
33	M25819	Cgl	148N	23.62	Bsu	membrane-associated protein
34	M89931	Cgl	 76N*	14.60	Pae	branched-chain amino acid carrier protein
35	M58020	Mle	128C	34.24	Ecl	enoylpyruvate transferase
36	X56657	Mle	 77C	21.92	Eco	6-O-methylguanine-DNA-methyltransferase
37	M95576	Mle	166W*	80.92	Mtu	grpT (grpE-like protein)
38	X06422	Mtu	127W	 6.54	Bsu	glnR regulatory protein
39	M94109	Mtu	 74C	24.96	Cgl	ORF X
40	M30046	Mtu	218N*	33.96	Eco	phosphate transport protein pstC
41	S37797	Mtu	 89I	 9.42	Mtu	probable antigen
42	S61892	Mtu	 88C	11.57	Pae	non-hemolytic phospholipase C
43	J03838	Mtu	310N	12.54	Psp	alkyl sulfatase
44	Z12001	Rfa	108W	 7.80	Eco	transcriptional regulatory uhpA
45	X52980	Sco	 51C	12.40	Spo	ATP-dependent transporter
46	M18244	Slm	 56N	35.23	Sal	ORF 2
47	M92297	Slv	114C	35.89	Sat	tyrosinase trans-activator
48	Y00142	Slv	111C	22.27	Sli	probable transcriptional activator
49	M80346	Smt	 92C	11.59	Ser	cytochrome P450
50	X53401	Sri	 88C	 8.14	Eco	nitrate-responsive regulator narP
51	M57297	Ssc	115C	11.33	Eco	succinate-semialdehyde dehydrogenase
52	S43326	Stc	 48C	13.49	Sco	yw12(ORF)
53	D90006	Stm	137N	17.01	Sau	antiseptic resistance protein
54	X62835	Bac	311W	21.60	Eco	lipase-like enzyme
55	M24074	Ban	 80N	10.74	Eco	adenine phosphoribosyltransferase
56	M93419	Bas	 87C	39.68	Bsu	excinuclease ABC subunit C
57	D00312	Bas	 48I	10.44	Eco	ycfA (ORF)
58	D10487	Bat	127W*	 7.10	Tpe	yr33 (ORF)
59	X61286	Bbr	 57C	14.40	Bsp	beta-mannanase
60	D00863	Bbr	165N	34.22	Eco	yihA (ORF)
61	X61658	Bbr	 65C	12.41	Eco	inner membrane protein envZ
62	M13148	Bca	 23C	11.59	Bst	tyrosyl-tRNA synthetase
63	X55703	Bca	 25C	 8.00	Bsu	chorismate mutase
64	X53507	Bce	256C	98.85	Bas	neopullananase
65	X07723	Bci	 75N	13.66	Bsu	stage II sporulation protein J
66	X52880	Bci	 77C*	34.85	Bsu	GMP synthase
67	M16657	Bci	199C*	19.57	Ctc	xylanase
68	M74818	Bco	165W	78.44	Eco	mannose-specific PTS enzyme II
69	X53930	Bfi	 56C*	17.38	Bca	DNA Polymerase I
70	X12797	Bla	 25N	 6.35	Bsu	homoserine kinase
71	Y00140	Bla	 28C	13.12	Cgl	homoserine dehydrogenase
72	M37169	Bli	262W*	134.08	Bme	glucose 1-dehydrogenase
73	X00413	Bli	 50W	26.01	Bsu	ribosomal protein L33
74	M12777	Bma	106N	33.44	Sau	plasmid pUB110 ORF
75	Y00154	Bme	 24C	 9.16	Bsu	grpE-like protein
76	D90243	Boh	 88N	37.41	Bsp	neopullulanase
77	D90243	Boh	160N	 6.57	Spn	maltose transport protein malX
78	M60211	Bpo	122W	25.37	Cth	yamY (ORF)
79	X57094	Bpo	 59C	18.01	Fsc	enniatin synthetase
80	K00544	Bpu	133N	28.59	Bsu	glucose-starvation inducible gene gsiAA
81	S76941	Bpu	 46C	 9.89	Bsu	xylose repressor
82	S76941	Bpu	128C	15.64	Eco	yihO (ORF)
83	X05793	Bpu	630C	 5.72	Eco	yihP (ORF)
84	D00712	Bre	160C	 9.85	Zra	acetoacetyl-CoA reductase
85	M29291	Bsh	183C	29.19	Eco	threonine dehydratase, catabolic
86	X64809	Bsh	 48C	 8.02	Lmo	p60
87	M34237	Bst	 72C	 5.92	Bsp	Bleomycin resistance protein
88	D00539	Bst	113N*	39.68	Bsu	histidinol-phosphate aminotransferase
89	M24493	Bst	113W*	26.10	Bsu	sigma-54 factor
90	M57457	Bst	 36C	 7.15	Pla	major tail protein V
91	M34826	Bsu	156W	14.06	Aox	6-hydroxy-D-nicotine oxidase
92	X15659	Bsu	 68C	20.00	Bsu	stage II sporulation protein J
93	M16189	Bsu	 60C	16.66	Bsu	transcriptional regulatory degU
94	M37388	Bsu	241C*	40.01	Bsu	glucose-starvation inducible protein gsiAA
95	M34053	Bsu	 48C	 7.49	Can	cysteine synthase
96	M74010	Bsu	 97N	21.15	Ech	L-asparaginase
97	M59757	Bsu	138C	11.27	Eco	yceC (ORF)
98	X02988	Bsu	147W	14.51	Hin	very-short-patch-repair endonuclease
99	X53307	Bsu	 76N	 7.49	Lca	PTS factor II, lactose-specific
100	D00854	Bsu	193W	75.57	Lde	ORF 5' to glnA
101	M77238	Bsu	152C	24.92	Lla	probable ATP-dependent protease
102	L03181	Bsu	 96N*	30.77	Lla	2-isopropylmalate synthase
103	M19299	Bsu	127C	10.82	PBS	xre 3' orf
104	M99611	Bsu	100C	 7.02	Pce	2,2-dialkylglycine decarboxylase
105	J03006	Bsu	268W	31.70	Sty	nirC protein
106	L04470	Bsu	140W	27.96	Sxy	arsenic efflux pump
107	D90189	Bsu	137N*	42.74	Sys	peptidyl-prolyl cis-trans isomerase
108	X14178	Bth	220N*	51.28	Csa	beta-glucosidase
109	M30503	Bth	 75C	 5.62	Eco	possible integrase/recombinase xprB
110	X55436	Bth	 95N	11.01	Hom	aldehyde dehydrogenase type III
111	M35107	Cac	260N	14.12	Bsu	transcriptional regulator degU
112	X65276	Cac	 58C	16.96	Eco	replication protein dnaB
113	M30196	Cbo	104C	35.29	Cby	non-toxic component of toxin complex
114	M92906	Cbo	 58C	24.00	Cby	non-toxic component of toxin complex
115	M95180	Ccl	 41C	24.74	Bsu	DNA polymerase III, alpha chain
116	L02868	Clo	124C	16.80	Ckl	membrane protein 
117	M11214	Cpa	 49N	 8.24	Eco	PTS factor III, glucose-specific
118	X62915	Cpe	 90C*	21.59	Cac	grpE-like protein
119	X62914	Cpe	141W	 5.60	Pae	secretion protein
120	X12575	Csa	 99C	25.64	Eco	6-O-methylguanine DNA methyltransferase
121	M34459	Csa	 57C	17.92	Tsa	beta-xylosidase
122	D13268	Cst	375W	33.47	Eco	purine synthesis repressor
123	M57579	Cth	 85C*	30.80	Ara	inner membrane lactose transport protein
124	S60770	Efa	140C	13.21	Bme	ORF near glucose dehydrogenase
125	S60770	Efa	 70C	12.04	Bsu	membrane bound protein
126	M98865	Erh	 23C	 6.62	Bsu	grpE-like protein
127	M26929	Lca	151C*	34.35	Bsu	O-6-methylguanine DNA alkyltransferase
128	X66723	Lhe	102W	14.03	Eco	ORF
129	M84770	Lla	 37C	 7.46	P54	integrase
130	X61210	Lmo	 34C	17.6	Liv	ribose-phosphate pyrophosphokinase
131	M83946	Lpa	 94C	33.15	Bst	ribosomal protein L12
132	M32342	Mga	 48C	 8.60	Bna	acyl carrier protein precursor
133	X61529	Mge	 50C	28.64	Mpn	DNA gyrase subunit B
134	X61511	Mge	 74C	18.13	Tth	aspartyl-tRNA synthetase
135	M21590	Mmy	 57C	22.64	Bst	ribosomal protein S15
136	X60513	Msm	124N	38.96	Mmu	pyruvate carboxylase
137	X60513	Msm	105C	 7.26	Shy	carboxyphosphonoenolpyruvate phosphonomutase
138	X06414	Myc	153C	11.80	Hpo	ORF 4
139	X06414	Myc	 39N	 6.01	Sty	methionyl aminopeptidase
140	M76403	Pas	242N*	16.24	Eco	nirC protein
141	X64389	Sau	164W	36.77	Bsh	bioX protein
142	M63176	Sau	 82N	19.60	Eco	DNA ligase
143	X16457	Sau	 84C	26.38	Rno	3-ketoacyl-CoA thiolase B
144	M69236	Sct	 61C	21.19	Efa	ORF
145	M36849	Smu	119W	25.59	Eco	rbs repressor
146	X13136	Spn	 29N	 8.43	Bsu	recombination protein recM
147	M14339	Spn	155C	18.82	Eco	probable permease
148	X05577	Spn	141C	17.51	Eco	streptothricin acetyltransferase
149	M86905	Spy	 61N	 8.14	Spy	exotoxin type B precursor
150	M74770	Xmy	119N	50.47	Myc	ribosomal protein L16
151	X66978	Cfr	128N	34.42	Eco	tryptophan-specific transport protein
152	Z14002	Cfr	 35N	14.14	Eco	nicotinate-nucleotide pyrophosphorylase 
153	J03433	Eae	143N	26.64	Bsu	als operon regulatory protein
154	J03433	Eae	 47N	 9.85	Kte	alpha-acetolactate synthase
155	V00255	Eca	 91C	42.26	Eco	mioC (ORF)
156	M59909	Eca	124C*	64.96	Eco	lipoprotein-28 precursor
157	M36651	Eca	103C*	31.54	Eco	exonuclease VII
158	M62739	Ech	129W	74.89	Eco	ATP synthase E chain
159	Y00549	Ech	 47C	27.19	Eco	nitrogen regulatory protein P-II
160	M14509	Ech	 76W	19.55	Eco	ferrisiderophore reductase
161	X63207	Ech	 39C	15.54	Eco	plasmid F traM protein
162	M31456	Ech	 30C	12.24	Eco	L-ribulose-phosphate-4-epimerase
163	M31308	Ech	 90C*	46.12	Eco	rep helicase
164	M88012	Ecl	134N	74.39	Cvi	groEL chaperonin
165	X61919	Eco	 64C	19.82	Ace	phosphoribulokinase
166	M58000	Eco	177C*	15.82	Aeu	cation efflux system protein
167	X03691	Eco	 76C	28.43	Bst	glutamine transport protein, ATP-dependent
168	X61239	Eco	 98W	10.60	Bst	ORF
169	M34333	Eco	 61W	 6.02	Bst	ORF
170	X57947	Eco	117N	14.47	Bsu	yrtP (ORF)
171	X07091	Eco	183C	17.48	CCp	ORF near psaC
172	M64541	Eco	 29C	 8.89	Cpa	glyceraldehyde-3-phosphate dehydrogenase
173	S37527	Eco	114N	 7.01	Cpe	yngB (ORF)
174	J03732	Eco	 39C	20.77	Ech	2-keto-3-deoxygluconate oxydoreductase
175	L03308	Eco	 72C	24.25	Eco	hypE-homolog
176	M93362	Eco	 73N	14.59	Eco	thermoregulatory protein envY
177	J01619	Eco	103W	12.89	Eco	pap fimbrial protein precursor
178	M30139	Eco	 64C	11.74	Eco	plasmid killer protein pnd2
179	M61713	Eco	 49N	 7.74	Eco	pilus assembly protein
180	M23240	Eco	135C	 6.85	Eco	preprotein translocase secA subunit
181	J04039	Eco	 77C	 6.07	Eco	tRNA uracil-5-methyltransferase
182	M14018	Eco	 29N	 5.74	Eco	plasmid R1 ORF yprC
183	M69116	Eco	194C*	15.47	Eco	enterobactin synthetase component E
184	M64977	Eco	 72M	14.27	Eco	3-deoxy-manno-octulosonate cytidylyltransferase
185	X53983	Eco	105N	10.49	Gma	early nodulin
186	K01197	Eco	133C	77.04	Hin	glycinamide ribonucleotide transformylase
187	X02306	Eco	103N	23.44	Hin	aldose 1-epimerase
188	M93984	Eco	190N	17.82	Hin	ORF
189	M36649	Eco	100N	15.20	Hin	fimbriae structural chain
190	M76389	Eco	414W*	42.54	Hin	ORF near com101A gene
191	X57560	Eco	110N	37.15	Hse	nif-specific regulatory protein
192	X07520	Eco	 91C	 5.77	Kpn	nif-specific regulatory protein
193	M73320	Eco	 62N	 8.96	Oar	11-beta-hydroxysteroid dehydrogenase
194	X12982	Eco	100C	17.64	Pae	carbamate kinase
195	M33020	Eco	229C*	30.70	Pae	protein secretion factor pilC
196	M55249	Eco	 76W	34.20	PB1	PB1 protein 2
197	M55249	Eco	 67W	27.52	PB1	PB1 protein fil
198	M64472	Eco	 77N	13.51	Pmi	major fimbrial subuint
199	X62121	Eco	167C	116.33	PP1	gene 16 protein
200	M55249	Eco	221C*	60.17	PP2	terminase
201	M88334	Eco	120N	16.09	Psp	ORF 
202	M15273	Eco	 96C	 6.41	Scp	nitrate transporter
203	M96235	Eco	181C	 6.74	Sli	chloramphenicol resistance protein
204	J03725	Eco	 76N	35.25	Sma	yphL (ORF)
205	D90227	Eco	 70C	 9.77	Smu	galactose-6-phosphate isomerase
206	M24856	Eco	111C	65.36	Sty	yprO (ORF)
207	M21451	Eco	116W	57.62	Sty	ypts (ORF)
208	X04704	Eco	 70N	40.37	Sty	branched chain amino acid carrier protein
209	M12858	Eco	 18N	 6.96	Sty	ymt2 (ORF)
210	X62530	Eco	297C	 5.82	Sty	lipopolysaccharide heptosyltransferase-1
211	M27273	Eco	 75N*	21.02	Sty	fructokinase
212	M31532	Eco	 32I	11.96	Zmo	alcohol dehydrogenase I
213	M87280	Ehe	404W	90.82	Hau	ydlM (ORF)
214	D90087	Eur	117C*	51.80	Eco	enoylpyruvate transferase
215	M36068	Kae	 78N	24.16	Brb	amiE 3' region ORF
216	S81065	Kox	 27C	13.05	Kpn	pullulanase secretion envelope pulD
217	X53433	Koz	182C	 9.37	Eco	yihW (ORF)
218	M28676	Kpn	 47N	19.40	Eco	transcriptional regulstor nadR
219	X16817	Kpn	 33N	14.42	Eco	demethylubiquinone methyltransferase
220	X13303	Kpn	 84C	12.14	Sco	ORF J12
221	D11025	Sfl	 85N	32.48	Eco	multicopy suppressor of htrB
222	X13131	Sfl	 29C	16.82	Eco	UDP-glucose pyrophosphorylase
223	X66849	Sfl	281W	73.01	Hin	glycinimide ribonucleotide transformylase
224	J03391	Sin	107C	49.80	PP4	integrase
225	M94066	Sma	169C	115.28	Eco	sigma-70 factor
226	X60821	Sma	170C	102.43	Eco	yaaA (ORF)
227	M68877	Sma	 78C	 6.03	Sma	fimbrial protein smfE
228	M27219	Sma	 32N	13.68	Sty	flagellar operon sigma factor
229	D10257	Spu	 78N	49.85	Sty	oxaloacetate decarboxylase alpha chain
230	X54548	Sty	 88C	57.52	Eco	deoxyGTP triphosphohydrolase
231	M29687	Sty	 95N	55.59	Eco	tRNA modification enzyme miaA
232	S75596	Sty	102N	50.77	Eco	yjaB (ORF)
233	X07689	Sty	 82N	49.33	Eco	catalase hydroperoxidase I
234	M64606	Sty	 68C	46.52	Eco	nirD protein
235	M68936	Sty	 62N	37.59	Eco	cell division protein sufI
236	M62725	Sty	 62N	27.12	Eco	spermidine/putrescine transport protein
237	J01798	Sty	 51W	25.07	Eco	ubiX/dedF (ORF)
238	M26046	Sty	 45C	24.06	Eco	ribonuclease HII
239	S53120	Sty	 68W	23.96	Eco	fumarate hydratase
240	M89481	Sty	 46N	21.06	Eco	D-glutamate biosynthetic protein murI
241	M24021	Sty	 51C	20.82	Eco	DNA topoisomerase III
242	M57431	Sty	 42N	19.48	Eco	cold shock protein 7.4
243	S42598	Sty	 39C	12.85	Eco	attaching and effacing protein
244	X63336	Sty	 35N	11.70	Eco	yafA (ORF)
245	M10894	Sty	 24C	11.02	Eco	gamma-glutamyl phosphate reductase
246	X05382	Sty	 22C	 9.80	Eco	osmotically inducible lipoprotein
247	M29701	Sty	 16N	 6.41	Eco	URF downstream of dnaE
248	X12374	Sty	217C*	125.70	Eco	phosphoenolpyruvate carboxykinase
249	X12569	Sty	130C*	37.30	Eco	ycdA 
250	D10015	Sty	 52N*	18.00	Eco	putative ATP-dependent RNA helicase rhlB/mmrA
251	M84575	Sty	 96N	 6.57	Kae	ribitol dehydrogenase
252	M55342	Sty	108C	25.59	PLa	y194 (ORF)
253	D12589	Sty	 68N	13.92	PP1	phage P1 phd gene product
254	X53368	Yen	 63C	22.36	Sty	negative regulator of flagellin synthesis
255	X67771	Yen	 40N	24.29	Yps	low calcium response protein lcrR
256	S65012	Ype	 46C	32.77	Yen	ylc4 (ORF)
257	X66859	Aci	169N	53.21	Eco	yhbF (ORF)
258	M74510	Bap	113N	60.70	Eco	RNA Polymerase alpha subunit
259	M76589	Bap	 19N	 7.03	Eco	ribosomal protein L20
260	M76589	Bap	112C	75.89	Kpn	translation initiation factor IF3
261	M88613	Cbu	 89C*	24.38	Eco	sigma-32 factor
262	M13765	Dno	 57N	11.92	Bsu	enolpyruvylshikimate phosphate synthase
263	M33459	Hin	 35N	 8.30	Bja	hupD gene product
264	HEA205U 	M33457	Hin	 45I	10.31	Bsh	DAPA aminotransferase
265	M94855	Hin	158W	12.10	Bsu	poly(glycerol-phosphate) alpha-glucosyltransferase
266	M99049	Hin	 25C	 6.11	Cvi	ORF 
267	M37487	Hin	112N	60.54	Eco	glycerol facilitator protein
268	X52124	Hin	147C	54.60	Eco	RNA polymerase beta-prime chain
269	M27280	Hin	203C	37.33	Eco	protease IV
270	M18878	Hin	 72C	35.49	Eco	tolB protein
271	M33454	Hin	 71I	24.47	Eco	phosphate transport protein pstC
272	X57315	Hin	 53C	10.15	Eco	cytochrome C
273	M33441	Hin	 27I	 9.77	Eco	methionyl tRNA-synthetase
274	X56903	Hin	170C*	58.57	Eco	rRNA methylase
275	J03359	Hin	109C*	35.68	Eco	N-acetylglucosamine-6-phosphate deacetylase
276	M33458	Hin	 90C	28.28	Efa	K/Cu transporting ATPase A
277	M87490	Hin	 66C	26.52	Sty	3-isopropylmalate dehydratase
278	D10668	Hpa	106C	49.57	Eco	methionine synthase
279	S75161	Hso	 52N	15.82	Eco	stringent starvation protein
280	S62141	Lmi	167N	30.08	Eco	L-serine dehydratase 1
281	D12922	Lpn	142N	27.92	Bst	acetylornithine transaminase
282	M31830	Lpn	 29N	 7.80	Eco	DNA Pol III gamma/delta subunit precursor
283	L06160	Pae	295C	15.54	Bfi	DNA photolyase
284	L06161	Pae	119N	15.38	Eco	integron In7 ORF341
285	M74132	Pae	 35N	10.62	Eco	yigM (ORF)
286	L06157	Pae	199N*	72.85	Eco	D-fructose-6-phosphate amidotransferase
287	M63283	Pae	203C*	50.47	Eco	yaaA (ORF)
288	M27175	Pae	213N	52.18	Pae	killer protein of pyocin s1
289	L06160	Pae	 66N	15.77	Pae	aminoglycoside 3'-N-acetyltransferase
290	L06157	Pae	140C	 5.85	Pmi	urease accessory protein ureE
291	M59036	Pae	162C	10.66	Sty	ORF
292	M94078	Pae	 87C	 6.59	Sty	uroporhyrin-III C-methyltransferase 
293	X14913	Pfl	147N	 7.89	Nta	cinnamyl-alcohol dehydrogenase
294	X54523	Pfl	 32C	 7.74	Pfl	endoglucanase A
295	M59210	Pha	219C*	64.66	Eco	periplasmic arginine binding protein
296	M30186	Pmi	 52N	 7.14	Efa	K/Cu transporting ATPase A
297	M68901	Pmu	 39N	11.41	Eco	nitrate/nitrite response regulator narP
298	X12975	Pph	 63N	13.02	Sqa	Dogfish CFTR homolog
299	M83673	Pps	136C	83.54	Psp	ORF near bph operon
300	M19460	Ppu	 60N*	16.80	Aci	catechol 1,2-dioxygenase
301	M57613	Ppu	175W	30.41	Eco	leucine-responsive regulatory protein
302	M60276	Ppu	112N	74.09	Psp	dmpR transcriptional regulator
303	J05293	Ppu	143W	37.70	Psp	positive regulatory gene
304	M35140	Ppu	140N	37.62	Sty	proline permease component
305	J03681	Psy	409W*	24.03	Bsh	DAPA aminotransferase
306	X17150	Psy	 59N	22.40	Kae	urea amidohydrolase 
307	M55911	Psy	161C	91.36	Ppu	trpE 5' region ORF
308	M28524	Psy	 42C	13.15	Psy	probable regulator of pathogenicity 
309	M73971	Psz	 62C	22.21	Yen	phosphoserine aminotransferase
310	M81087	Tfe	 53N	 9.80	Bme	tms protein
311	S64997	Tfe	 46C	12.00	Tfe	lysR-type protein rbcR
312	X16050	Val	 27N	 7.66	Eco	yieA (ORF similar to tms proteins)
313	X62635	Val	160C*	17.64	Eco	putrescine transport protein
314	X55363	Vch	 94C	14.24	Eco	erythronate-4-phosphate dehydrogenase
315	X15438	Vch	279N*	95.68	Eco	tRNA (uracil-5-)-methyltransferase
316	M74035	Vch	 50C	15.55	Val	fructokinase
317	X06758	Vfi	 41N	 8.80	Vha	luciferase beta chain
318	X06758	Vfi	 86C	36.35	Xlu	acyl transferase
319	D90101	Vpa	122C	62.82	Bsu	ytdK (ORF)
320	S75324	Xca	 93N*	25.68	MSs	succinyl-CoA:alpha-ketoacid coenzyme A transferase
321	S63844	Xca	 79C	 7.13	Vpr	neutral protease precursor
322	X14716	Aau	152N*	37.19	Rca	ynf1 (ORF in nifB 3' region)
323	X62690	Abr	121C*	30.37	Pae	modification methylase
324	X67216	Abr	255N	29.60	Psp	carboxymethylenebutenolidase
325	M94886	Abr	179C	 6.02	Sco	ORF in whiB 3' region
326	M96433	Aeu	 75N	22.85	Ach	hydrogenase accessory protein HupA
327	M69036	Aeu	151W*	68.00	Ain	bacterioferritin
328	M59353	Aeu	 67C	22.89	Eco	yhfA (ORF)
329	J05003	Aeu	 59C	21.47	Eco	ATP-dependent protease, binding subunit
330	M69036	Aeu	187C*	59.48	Eco	glutathione synthetase
331	X52414	Aeu	114N	31.44	Ppu	todJ; todF product hydratase
332	M63007	Ain	120C	20.06	Sty	chemoreceptor
333	M32871	Ama	 69C	24.39	Pfl	lepA homolog
334	D00521	Apo	 81C	12.60	Mmu	xanthine dehydrogenase
335	S40757	Ara	131C	21.82	Cth	beta-galactosidase
336	Z15003	Atu	115C	17.42	Smu	sucrose phosphorylase
337	M20404	Bab	139C	10.74	Eco	peptidoglycan synthesis protein murI
338	M31765	Bja	 48N	11.03	Bja	ORF
339	M60874	Bja	 47N	 9.74	Bsu	aconitate hydratase
340	X54638	Bja	 72N*	16.70	Eco	ybaD (ORF in nusB 5' region)
341	M16751	Bja	116N	39.37	Eni	catabolic 3-dehydroquinase
342	M16493	Bpa	126N	 7.03	Atu	virulence factor B4.1
343	M14378	Bpe	205N	 6.52	Atu	virulence factor B4.1
344	X14199	Bpe	 56N	 9.85	Psp	transcriptional activator sdsB
345	M16492	Bro	205N	 6.08	Atu	virulence factor B4.1
346	X03720	Brs	 87W	17.00	Bja	nodulation protein
347	M35190	Cco	 51C	 8.29	Bsu	pyrrolidone-carboxylate peptidase
348	M26955	Ccr	 73N	 8.82	Ccr	Flagellar hook protein
349	M91448	Ccr	 75N	10.51	Hin	ORF (homolog of Eco dskA)
350	M63448	Cje	 67C	15.19	Ype	ferric uptake regulation protein
351	X58242	Cru	209W	18.11	Eco	ribonuclease III
352	Z12609	Eik	177C	23.64	Eco	yaeB (ORF)
353	Z12609	Eik	124C	36.31	Fno	ATP-dependent transporter valA
354	X56977	Mbo	145N*	49.52	Eco	threonine deaminase
355	X07856	Mes	 81N	51.32	Mex	moxR protein
356	X55394	Mtr	 55C	 7.92	Cac	60 KD chaperonin
357	M60861	Mxa	127C	 6.07	Eur	phytoene dehydrogenase
358	X04835	Ngo	 41C	10.12	Lca	tryptophan synthase beta chain
359	S85411	Ngo	 64C	16.92	Syp	zinc finger protein
360	X68062	Nme	120W	 9.74	Bsu	phospho-2-dehydro-3-deoxyheptonate aldolase
361	X68062	Nme	121W	36.04	Eco	yhbF (ORF)
362	X05934	Pad	170C	23.32	Eco	beta lactamase
363	M17522	Pad	 73N	13.62	Eco	ribokinase
364	J05282	Pce	262W*	15.89	Ans	keyoacyl reductase
365	M58494	Pce	 45C	11.70	Psz	nosA protein
366	M58445	Pol	205W	119.17	Pae	ORF
367	M58445	Pol	 95C	57.44	Pae	phaC1 5' region ORF
368	D90355	Ppa	 84N*	14.66	Bme	glucose 1-dehydrogenase A
369	X16732	Psa	 71N	22.30	Eco	maltose permease lamB
370	S75887	Psm	 91C	29.92	Pae	methylmalonate-semialdehyde dehydrogenase
371	M99632	Pso	270C	43.07	Rfr	nodulation protein
372	M99631	Pso	569C	50.27	Yen	yscC (ORF)
373	M18278	Psp	 81C	 9.54	Bme	glucose 1-dehydrogenase
374	M61114	Psp	124N	37.62	Eco	probable transport protein witA
375	M80212	Psp	146C*	16.72	Ppu	positive regulatory protein
376	M15201	Psp	170C	60.34	Psp	ytcB (ORF)
377	S77431	Psp	 46C	12.48	Psp	tnpA (ORF)
378	S37018	Psp	110W*	26.54	Psp	hydantoin racemase
379	D10069	Psp	 49C	13.00	Psz	nosA protein
380	M22077	Psp	124C	11.05	Sco	putative ketoacyl reductase
381	K02081	Pst	 83W	11.60	PB1	late control protein B
382	X12585	Pvu	 23C	 9.52	Eco	transcription anti-terminator nusG
383	X51816	Pvu	129C	76.28	Pmi	urease operon protein ureD
384	X51816	Pvu	 88N	46.80	Pmi	urease accessory protein ureE precursor
385	L02348	Rca	 95C	15.80	Aeu	NAD-reducing hydrogenase beta subunit
386	X63462	Rca	134C	23.72	Eco	protein export membrane protein secF
387	M12776	Rca	 55C*	23.34	Tve	ORF
388	X63291	Rhs	 85N	34.55	Atu	regulatory protein chvI
389	M16710	Rhs	 42N	15.59	Rhs	nitrogenase molybdenum-iron protein 
390	S108191 	S38912	Rle	136C*	26.04	Ain	nifQ protein
391	X65619	Rlo	 96W	15.34	Rhs	nodulation protein A
392	M57565	Rme	112C	36.16	Bsu	flagellar protein FliP
393	M94191	Rme	 84N	32.42	Ccr	usg protein
394	M96584	Rme	 46C	12.57	Eco	yajF (ORF)
395	V01215	Rme	 59N	19.96	Rle	nitrogenase alpha subunit
396	M11268	Rme	144N*	46.80	Rlo	nodulation protein I
397	K01467	Rme	 82C	13.92	Rne	nfe1 protein
398	M83823	Rsp	 60C	 6.55	Ccr	aminopeptidase N
399	X56157	Rsp	 89C	19.19	Eco	probable transport protein
400	M83823	Rsp	216N*	18.44	Hvo	histidinol-phosphate aminotransferase
401	M14732	Rsp	 41C	 6.62	Rca	ypuM (ORF)
402	Z11601	Sta	527W*	 9.30	Cde	galactose oxidase
403	M95300	Sta	 51C	23.55	Mxa	pyridoxamine 5'-phosphate oxidase
404	S37355	Wsu	167C	 5.49	Pvu	nitrogen regulation protein NR(I)
405	X51509	Wsu	199W	37.96	Wsu	fumarate reductase cytochrome b subunit
406	M62957	Zmo	158W	37.07	Pae	glutathionine reductase
407	M18802	Zmo	112C	10.01	Rsp	transketolase
408	M28681	Bbu	 62C	20.59	CCp	ribosomal protein L5
409	M58431	Bbu	121C	 8.28	Sce	sec63/npl1 protein
410	M57256	Bhe	336W	10.33	Bhe	outer membrane lipoprotein
411	M86838	Bhe	109N	13.05	Bst	permease protein glnQ
412	M96579	Lbo	258C*	18.35	Bsu	DNA primase
413	D00598	Tde	179N	30.89	Bca	DNA polymerase I
414	M32401	Tpa	119N	25.40	Ath	adenine phosphoribosyltransferase
415	M17716	Tpa	 70C	20.05	Eco	alanine tRNA-synthetase
416	M63029	Bfr	 84C	17.62	Eco	bacterioferritin comigratory protein
417	M34831	Bfr	 63W	13.96	Pvu	sugE protein 2 homolog
418	M69217	Cpn	 34N	14.00	Cps	hypB chaperonin homolog
419	M69227	Cpn	 50C	21.36	Ctr	grpE-like protein
420	S83995	Cpn	 79N*	28.82	Eco	RNA polymerase, beta chain
421	S90059	Ctr	 28N	 8.68	Bst	elongation factor G
422	M31739	Ctr	 27N	 8.34	Cps	hypB chaperonin homolog
423	M31119	Ctr	116C*	36.92	Eco	succinyl-CoA synthetase; alpha chain
424	X60678	Ctr	 92N	28.74	Sci	ribosomal protein S2
425	M59306	Dra	 41C	16.03	Mmu	beta enolase
426	S77498	Har	279N*	15.54	Eco	glycine cleavage system T protein
427	X56033	Taq	215C*	34.04	Cgl	aspartate kinase
428	X16595	Taq	 35N	14.64	Tth	phosphoglycerate kinase
429	X07804	Tba	 82W	16.62	Bme	ORF
430	D00728	Tba	201C*	101.64	Bsu	putative cytochrome A assembly factor
431	S53348	Tth	 55W	19.39	Bst	ribosomal protein L33
432	M26923	Tth	126W	23.02	Cac	ORF
433	M32108	Tth	 91N	29.35	Ddi	thymidine kinase complementing protein
434	X06657	Tth	 42N	14.52	Eco	ribosomal protein S10
435	K01444	Tth	180C*	 5.59	Pbl	3-isopropylmalate dehydratase
436	Z12118	Tth	117N	 8.13	Spe	aklavinone C-11 hydroxylase
437	X64557	Tth	143N*	34.04	Tfe	yntR (probable transport protein)
438	X16399	Xsp	148W	87.80	Eco	universal stress protein A