Yonatan Grad and George M. Church, Prediction of similarly acting cis-regulatory modules by subsequence profiling and comparative genomics in D. melanogaster and D. pseudoobscura, submitted
The PF-Sampler and PF-Searcher programs are available as source code that may be compiled on UNIX systems. Go here for information on how to compile the program under UNIX systems. Help on running the program can be obtained by executing it without parameters.
The Program is a research tool still in the development stage. This license Agreement is entered into in order to encourage scientific collaboration aimed at further development and use of The Program.
OWNERSHIP OF PROGRAM.
The Program is protected by copyright laws and foreign treaties, and is the subject of a United States patent application, all foreign rights protected. All title, ownership rights, and intellectual property rights in The Program shall remain in President and Fellows of Harvard College.
GRANT OF RIGHTS.
President and Fellows of Harvard College (hereinafter "HARVARD," "our") grants to LICENSEE (hereinafter "LICENSEE," "you," "your") a non-exclusive license to use The Program free of charge if (a) you are a student, faculty member or staff member of an educational institution, or an employee of an organization which meets HARVARD's criteria for a charitable, religious, or not-for-profit organization; and (b) your use of The Program is not for (i) the production or manufacture of products for sale, nor (ii) the performance of services for a fee. The Program is provided to you "as is," without any accompanying documentation, services or improvements from HARVARD.
You may create Derivatives of The Program in any medium. Any Derivatives you create shall be jointly owned by you and HARVARD. You are required to place the proper copyright notice on such Derivatives. (One acceptable form of such a notice is: ")[Year] President and Fellows of Harvard College and [Your Name]. All rights reserved.") At HARVARD's election, you shall send a copy of Derivatives to HARVARD within sixty (60) days of receiving notice from HARVARD requesting such a copy. The definition of the term "Derivatives," as used in this Agreement, includes translations of The Program to other foreign languages or other computer languages, adaptations of The Program to other hardware platforms, and all abridgments, condensations, revisions, modifications, enhancements you may make to The Program.
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The license granted by this Agreement will terminate automatically if you fail to comply with the limitations described herein. On termination you must (a) cease all use of The Program and destroy all copies of The Program in your possesion and, (b) cease all use of Derivatives and, at HARVARD's election, assign your copyright interests in the Derivatives.
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This Agreement represents the complete agreement concerning this grant of license and can only be amended in writing, executed by both you and HARVARD. In order to download The Program, you must click on the "Accept" box, which indicates your acceptance of the terms of this Agreement. (It is recommended that you also print a copy of this Agreement and keep it for your files.)
Any commercial use of this or other software can be discussed with the HMS Office of Technology Licensing (OTL) contact Maryanne Fenerjian.