AlignACE 3.0 10/20/99 AlignACE2 -i BS/BS_sum_all073_100.orf Parameter values: expect = 10 gcback = 0.38 minpass = 200 seed = 944258843 numcols = 10 undersample = 1 oversample = 1 Input sequences: #0 ydhE 145 similar to macrolide glycosyltransferase #1 yjiB 300 similar to monooxygenase #2 yjiC 22 similar to macrolide glycosyltransferase #3 pksS 300 hydroxylase of the polyketide produced by the pks cluster #4 bioI 68 cytochrome P450-like enzyme #5 bioW 251 6-carboxyhexanoate-CoA ligase #6 yvmC 300 similar to hypothetical proteins #7 vpr 300 extracellular serine protease Motif 1 TTCATTCATTTGTACCTTGCATGGG 0 1 1 CTTACCATAATCTTTCAATTTTTTTCTATTCTGC 1 113 0 TTTGTGGTAGTCCCTCTCTTTTTCGAAAGCGGGA 1 226 1 GGAACATTAATTGCTGAATTCTTTCAAGGGGAGT 1 268 1 CGACCTTCAATCCTTCGTTTTCTTGGTGAATAT 3 9 0 ATCGAGCCGTTTTTTCACTTTTTTCGTTCTTCTC 3 152 1 ACATTTCAAATCATTCTGTTTTTTGTAAACTAAT 3 234 1 GTGATTTTCTCCTTTCTGTTCAAAAATAA 4 49 0 CAAAACGGTCTTTTTCGATTTCTTTTTACAG 5 7 0 GAAAACGGTCTTTTTGTTTCCTTTTAACCAACTG 5 44 1 CTGCCATAAATCGATCCTTTCTTCTATTGACAGA 5 75 1 TTAGAATATATTATTCTCTCCTGTTTCTGTCAAT 5 100 0 AAAAAGTTTCTTCTTGCATCATTTCTCGCCCTTT 5 204 0 GCCATTCGTCTTGTTCAGTTGTTCTAGCTATTCC 6 221 1 TGTGATTAAGTTGTTCTTATCTTTGGGATAACTT 7 43 0 ATACACAGGTTTATTCACTTATACACAGGGTTCT 7 145 1 TTTGGACCATTTATTGGATTTTGTTTGTGTATAA 7 195 0 TTCAAAAAAATCCTTGTGTCATTTGGACCATTTA 7 216 0 ATATACTAGATCTTTCACATTTTTTCTAAATACA 7 262 1 ** *** ** *** MAP Score: 17.7883 Motif 2 CTCTCAAATCGTATTCTGACTCTTTGTTTGATCA 0 66 0 AAGACAGTATTGATTTTGAATTTTCCCTGCGGAA 0 115 1 CTTACCATAATCTTTCAATTTTTTTCTATTCTGC 1 113 0 CGACCTTCAATCCTTCGTTTTCTTGGTGAATAT 3 9 0 ATATCGAGCCGTTTTTTCACTTTTTTCGTTCTTC 3 150 1 ACTTTTTTCGTTCTTCTCCCTATTGAATGACGCC 3 168 1 ACATTTCAAATCATTCTGTTTTTTGTAAACTAAT 3 234 1 ATGATGTCGATTGTTTTTATTTTTGAACAGAAAG 4 33 1 GTGATTTTCTCCTTTCTGTTCAAAA 4 53 0 CAAAACGGTCTTTTTCGATTTCTTTTTACAG 5 7 0 AAAACGGTCTTTTTGTTTCCTTTTAACCAACTGC 5 45 1 CATAAATCGATCCTTTCTTCTATTGACAGAAACA 5 79 1 TTAGAATATATTATTCTCTCCTGTTTCTGTCAAT 5 100 0 TAAACATTAGTCATTTTATCCCTTTTCCTTCCAA 6 105 0 TTTCCAAATGTTTTTTAAGATTTTAATAATCATT 6 172 0 TCTTGTTCAGTTGTTCTAGCTATTCCATCTTGTA 6 229 1 TGTGATTAAGTTGTTCTTATCTTTGGGATAACTT 7 43 0 AATCCTTGTGTCATTTGGACCATTTATTGGATTT 7 208 0 GACACAAGGATTTTTTTGAATTTTCAAGAAATAT 7 230 1 ATATACTAGATCTTTCACATTTTTTCTAAATACA 7 262 1 TGTGTTTCCCCCTTTGTATTTAGAA 7 285 0 ** *** ***** MAP Score: 11.0728 Motif 3 TATATAGTTTTAGAGACAGGATTACATTTC 3 211 1 TCCTTTCTTCTATTGACAGAAACAGGAGAG 5 89 1 TAACCAATTATATTCAAAGGTTAACAATTA 5 131 0 TTGAAAACTTTATACACAAGTTATCCCAAA 7 26 1 GTATACAAAATATAGATAGAGTTTGTGGAC 7 91 0 TAACTATATATATACACAGGTTTATTCACT 7 134 1 TTTATTCACTTATACACAGGGTTCTGTGTA 7 154 1 ACGAAGGAGTTATACACAGAACCCTGTGTA 7 166 0 ACTCCTTCGTTATACACAAACAAAATCCAA 7 186 1 ATTTTTTCTAAATACAAAGGGGGAAACACA 7 280 1 ********** MAP Score: 10.9328 Motif 4 TGCAGAATAGAAAAAAATTGAAAGATTATGGTAAGAT 1 112 1 CTCCCGCTTTCGAAAAAGAGAGGGACTACCACAAATA 1 224 0 ATATTCACCAAGAAAACGAAGGATTGAAGGTCGTA 3 8 1 AAAGGCGCTGCTTTATATCGAGCCGTTTTTTCACTTT 3 136 1 AATTAGTTTACAAAAAACAGAATGATTTGAAATGTAA 3 232 0 AAACAATCGACATCATACCGATTGCTTTTATTGATTC 4 12 0 GTAAAAAGAAATCGAAAAAGACCGTTTTGTGTGAAAA 5 12 1 GGTTAAAAGGAAACAAAAAGACCGTTTTCACACAAAA 5 36 0 TAACCAACTGCCATAAATCGATCCTTTCTTCTATTGA 5 68 1 ATTGTTAACCAATTATATTCAAAGGTTAACAATTAGA 5 129 0 CGTTCGTATACAAAATATAGATAGAGTTTGTGGACAT 7 89 0 ATTCCTAACTATATATATACACAGGTTTATTCACTTA 7 129 1 * * *** ** * ** MAP Score: 8.1551 Motif 5 AGTAGTAGTCTGATCAAACAAAGAGTCAGAATACGATTTG 0 56 1 TGTTTTTATTTTTGAACAGAAAGGAGAAAATCAC 4 44 1 CTGTAAAAAGAAATCGAAAAAGACCGTTTTG 5 1 1 CGTGTAGCGCTTCTCACCTAAATTGTTAACCAATTATATT 5 147 0 CGTTCTTCAGTTATCAGTGAAAGGGCGAGAAATGATGCAA 5 185 1 TGCCCAAATATTTGAAAATAAATGTAAACATCACATTTTC 6 49 0 ATATTGACGTTTGGAAGGAAAAGGGATAAAATGACTAATG 6 95 1 GTATTGAAAATGATTATTAAAATCTTAAAAAACATTTGGA 6 164 1 TATTTGAGGGTGATGACTTAAAGCGGGATAAGTTTTAGGG 6 261 1 ATTTTGTTTGTGTATAACGAAGGAGTTATACACAGAACCC 7 172 0 CCCCTTTGTATTTAGAAAAAATGTGAAAGATCTAGTATAT 7 262 0 ** * **** * * * MAP Score: 7.35922 Motif 6 CAGAATACGATTTGAGAGGGAGTTGTCTACATGAA 0 82 1 CAGAGACGTTTTTTGAGCGGAGCGGTGCAATTGAA 1 21 1 TGCTGAATTCTTTCAAGGGGAGTGACCGTAC 1 279 1 CGCTGTATTATTTTGATGAAAGTGGCTGTCAGTCG 3 80 0 CCCTTTGAGCTTTCGTTCAAAGGCGCTGCTTTATA 3 118 1 TTGTTTTTATTTTTGAACAGAAAGGAGAAAATCAC 4 43 1 AAAAGACCGTTTTCACACAAAACGGTCTTTTTCGA 5 23 0 TGGTTAACAATTTAGGTGAGAAGCGCTACACGTTC 5 155 1 CATATTGACGTTTGGAAGGAAAAGGGATAAAATGA 6 94 1 CGGGATAAGTTTTAGGGGTGAATGAG 6 284 1 *** * * *** ** MAP Score: 6.57697 Motif 7 ACAGCAGTGCAGAATAGAAAAAAATTGAAAGA 1 105 1 ACGAAATTCGAGGGGGAATATATGATGCCTGC 1 151 1 GAAGAACGAAAAAAGTGAAAAAACGGCTCGAT 3 152 0 AATGACGCCTAAGATAGATATATAGTTTTAGA 3 193 1 CTCGCCTAATAGGGTAAATAGATGAATCAAAT 3 274 0 AAGAATCAATAAAAGCAATCGGT 4 1 1 TTTCTGTTCAAAAATAAAAACAATCGACATCA 4 34 0 TTGAACAGAAAGGAGAAAATCAC 4 55 1 AATAGAAGAAAGGATCGATTTATGGCAGTTGG 5 71 0 TGACAGAAACAGGAGAGAATAATATATTCTAA 5 102 1 TTATCAGTGAAAGGGCGAGAAATGATGCAAGA 5 195 1 GTTTGGAAGGAAAAGGGATAAAATGACTAATG 6 103 1 GATAAGTTTTAGGGGTGAATGAG 6 287 1 TGTATAACGAAGGAGTTATACACAGAACCCTG 7 170 0 TCTAAATACAAAGGGGGAAACACA 7 286 1 ***** **** * MAP Score: 5.10093 Motif 8 GTGCAGAATAGAAAAAAATTGAAAGATTATGGTAAG 1 111 1 TATTCACCAAGAAAACGAAGGATTGAAGGTCGTAAC 3 11 1 TTATTTTGATGAAAGTGGCTGTCAGTCGTGCTGGAT 3 72 0 GGAGAAGAACGAAAAAAGTGAAAAAACGGCTCGATA 3 151 0 TTTTATTTTTGAACAGAAAGGAGAAAATCAC 4 47 1 GTTAACCTTTGAATATAATTGGTTAACAATTTAGGT 5 136 1 ATGTCATGCTGAATATGCGTGTAAAAAGTGTGTGGA 6 15 1 CCAAATATTTGAAAATAAATGTAAACATCACATTTT 6 50 0 TTGACGTTTGGAAGGAAAAGGGATAAAATGACTAAT 6 98 1 TATGGGTATTGAAAATGATTATTAAAATCTTAAAAA 6 159 1 GTGTATAAGTGAATAAACCTGTGTATATATATAGTT 7 135 0 TTTGTATTTAGAAAAAATGTGAAAGATCTAGTATAT 7 262 0 *** * * ** *** MAP Score: 4.07427 Motif 9 ATCGTATTCTGACTCTTTGTTTGATCAGACTACTACTAATCGT 0 50 0 CATGAAGACAGTATTGATTTTGAATTTTCCCTGCGGAAGGCCA 0 111 1 GTTGAAAACAGAGACGTTTTTTGAGCGGAGCGGTGCAATTGAA 1 13 1 CGGTGCAATTGAATCCATATTGGATTTGCGTGCTTATGCCTAA 1 43 1 CGTTCATCTTACCATAATCTTTCAATTTTTTTCTATTCTGCAC 1 111 0 AACATTAATTGCTGAATTCTTTCAAGGGGAGTGACCGTAC 1 270 1 GCTTTATATCGAGCCGTTTTTTCACTTTTTTCGTTCTTCTCCC 3 145 1 GATGTCGATTGTTTTTATTTTTGAACAGAAAGGAGAAAATCAC 4 35 1 CACTATAAAAAGTTTCTTCTTGCATCATTTCTCGCCCTTTCAC 5 201 0 TATGATCTGTGCCCAAATATTTGAAAATAAATGTAAACATCAC 6 55 0 ATGTTTACTAGTAAACATTTATCATGATATGGGTATTGAAAAT 6 132 1 GTGTCATTTGGACCATTTATTGGATTTTGTTTGTGTATAACGA 7 192 0 CAAATGACACAAGGATTTTTTTGAATTTTCAAGAAATATATAC 7 225 1 * ** ***** * * MAP Score: 3.53086 Motif 10 CTTACCATAATCTTTCAATTTTTTTCTATTCTG 1 114 0 TTTGTGGTAGTCCCTCTCTTTTTCGAAAGCGGG 1 226 1 TCGTAACAGATCGTGCAGTATATACAATTGATA 3 40 1 TGGCTGTCAGTCGTGCTGGATATCAATTGTATA 3 60 0 ACATTTCAAATCATTCTGTTTTTTGTAAACTAA 3 234 1 AAAAGTTTCTTCTTGCATCATTTCTCGCCCTTT 5 204 0 TTGATATGTCATGCTGAATATGCGTGTAAAA 6 8 1 TTCTAGCTATTCCATCTTGTATTTGAGGGTGAT 6 242 1 GTCCACAAACTCTATCTATATTTTGTATACGAA 7 91 1 ATATACTAGATCTTTCACATTTTTTCTAAATAC 7 262 1 ** **** **** MAP Score: 3.51463 Motif 11 GCATGGGTTGTGTTCCCATTTTACGATTAGT 0 28 1 AAATCAATACTGTCTTCATGTAGACAACTCC 0 100 0 ATCTTTCAATTTTTTTCTATTCTGCACTGCT 1 107 0 GCCTGCCTGCTGTTATCAATTTAATTATTTG 1 199 1 TCGAGCCGTTTTTTCACTTTTTTCGTTCTTC 3 153 1 GATTCATCTATTTACCCTATTAGGCGAGGAG 3 278 1 ATGTCGATTGTTTTTATTTTTGAACAGAAAG 4 36 1 GTGATTTTCTCCTTTCTGTTCAAAA 4 53 0 CAAAACGGTCTTTTTCGATTTCTTTTTACAG 5 10 0 ACGGTCTTTTTGTTTCCTTTTAACCAACTGC 5 48 1 AAATCGATCCTTTCTTCTATTGACAGAAACA 5 82 1 ATATTCTAATTGTTAACCTTTGAATATAATT 5 125 1 GAATATAATTGGTTAACAATTTAGGTGAGAA 5 146 1 GAAAATGTGATGTTTACATTTATTTTCAAAT 6 49 1 CATTAGTCATTTTATCCCTTTTCCTTCCAAA 6 104 0 AAATGACTAATGTTTACTAGTAAACATTTAT 6 123 1 TCCAAATGTTTTTTAAGATTTTAATAATCAT 6 173 0 CCATTCGTCTTGTTCAGTTGTTCTAGCTATT 6 222 1 ACACAAGGATTTTTTTGAATTTTCAAGAAAT 7 231 1 TATACTAGATCTTTCACATTTTTTCTAAATA 7 263 1 TGTGTTTCCCCCTTTGTATTTAGAA 7 285 0 ******* *** MAP Score: 1.93269 Motif 12 TTCAATTGCACCGCTCCGCTCAAAAAACGTCTCTGT 1 20 0 GCCTAAGGTCACGTTGTGAGCCAAAACAGCAGTGCA 1 80 1 GTGATTTTCTCCTTTCTGTTCAAAAATAAAAACAAT 4 42 0 TCGAAAAAGACCGTTTTGTGTGAAAACGGTCTTTTT 5 23 1 GATCATATTGACGTTTGGAAGGAAAAGGGATAAAAT 6 91 1 TTAGGAATATACGTTCGTATACAAAATATAGATAGA 7 101 0 ***** * **** MAP Score: 1.45157