Douglas W. Selinger*†, Rini Mukherjee Saxena*‡, Kevin J. Cheung†, George
M. Church†, and Carsten Rosenow§‡
*These authors contributed equally to this work
§To whom correspondence should be addressed
†Harvard Medical School, Department of Genetics, Boston, MA 02115
‡Affymetrix Inc., Santa Clara, CA 95051
Affymetrix E. coli Microarray
Global RNA expression before rifampicin addition
(click here for higher resolution image - 387K )
Processed Data
-> 2,679 mRNA half-lives (non-linear least squares curvefitting),
tab-delimited
data , info
-> mRNA
half-lives (raw average differences, HL calculation by 2-fold method),
tab-delimited (Table 1, Figure 4)
-> Average
operon half-lives , includes 5'-3' positional patterns, tab-delimited
(Figure 1, Table 2)
-> Operon degradation pattern clustering (Figure 2)
Treeview formats: cdt
file , gtr
file
Viewing formats:
pdf file , ps
file
Data:
Tab-delimited ranks
-> High-resolution
operon degradation file , tab-delimited (Figure 3)
-> High-resolution transcript degradation (probe by probe, window size
= 5 probes, tab-delimited)
- watson strand (20
MB)
- crick strand (17
MB)
Raw Data
-> .CEL
files
Software
->
GAPS©
-> Cluster/TreeView