Bio 101: Genomics & Computational Biology

Tue Sep 18 Intro 1: Computing, statistics, Perl, Mathematica

Tue Sep 25 Intro 2: Biology, comparative genomics, models & evidence, applications

Tue Oct 02 DNA 1: Polymorphisms, populations, statistics, pharmacogenomics, databases

Tue Oct 09 DNA 2: Dynamic programming, Blast, multi-alignment, HiddenMarkovModels

Tue Oct 16 RNA 1: 3D-structure, microarrays, library sequencing & quantitation concepts

Tue Oct 23 RNA 2: Clustering by gene or condition, DNA/RNA motifs.

Tue Oct 30 Protein 1: 3D structural genomics, homology, dynamics, function & drug design

Tue Nov 06 Protein 2: Mass spectrometry, modifications, quantitation of interactions

Tue Nov 13 Network 1: Metabolic kinetic & flux balance optimization methods

Tue Nov 20 Network 2: Molecular computing, self-assembly, genetic algorithms, neural-nets

Tue Nov 27 Network 3: Cellular, developmental, social, ecological & commercial models

Tue Dec 04 Project presentations

Tue Dec 11 Project Presentations

Tue Jan 08 Project Presentations

Tue Jan 15 Project Presentations

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