DPInteract: Reference Keyword Field

3D-structure-comparison

3D-structure-comparison

Citations which compare the 3-dimensional structures of 2 or more proteins. Also includes reviews with significant emphasis of 3-dimensional structure

3D-structure-determination

Citations which experimentally determine the 3-dimensional structure of a protein

3D-structure-determination-nmr

Citations which determine the 3-dimensional structure by NMR

3D-structure-determination-xray

Citations which determine the 3-dimensional structure by X-ray crystallography

3D-structure-modeling

Citations which predict the 3-dimensional structure of a protein by modeling

binding-compilation

Compilations of DNA sites bound (or potentially bound) by a protein

binding-EMSA

Citations which identify protein-DNA binding by gel-shift

binding-footprinting

Citations which identify protein-DNA binding by footprinting

binding-SELEX

Citations which identify protein-DNA binding sites by in vitro selection experiments

mutant-binding

Mutations in a protein which alter binding

mutant-binding-specificity

Mutations in a protein which alter its binding specificity

mutant-operator

Mutations in the DNA binding site of a protein

mutant-null

Mutations which eliminate function of the DNA-binding protein

mutant-null-insertion

Null mutations due to insertions in a gene

mutant-null-deletion

Null mutants due to partial or complete deletion of a gene from the genome

mutant-null-deletion-inframe

Null mutants generated by in-frame deletions

mutant-null-stop

Null-mutants due to an in-frame stop codon

mutant-phenotype

Citations which describe the phenotype of protein mutants

Note: This database copyright 1994 Harvard University. Robison, K., and Church, G.M. DPInteract: A database on DNA-protein interactions. (1994). Electronically published and manuscript in preparation.

Please contact krobison@nucleus.harvard.edu to report additional data or problems with this database.

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