Types of interaction models
Quantum Electrodynamics subatomic
Quantum mechanics electron clouds
Molecular mechanics spherical atoms (101Pro1)
Master equations stochastic single molecules (Net1)
Phenomenological rates ODE Concentration & time (C,t)
Flux Balance dCik/dt optima steady state (Net1)
Thermodynamic models dCik/dt = 0 k reversible reactions
Steady State SdCik/dt = 0 (sum k reactions)
Metabolic Control Analysis d(dCik/dt)/dCj (i = chem.species) Spatially inhomogenous models dCi/dx
Increasing scope, decreasing resolution