This database is copyright 1994 the President and Fellows of Harvard College. Robison, K., and Church, G. DPInteract: A database on DNA-protein interactions. (1994). http://arep.med.harvard.edu/dpinteract/ Electronically published and manuscript in preparation.

For 55 E. coli DNA-binding proteins with known binding sites, we have compiled DNA-binding site matrices and performed searches over the complete E. coli K12 genome. The search matrices and results are located at: http://arep.med.harvard.edu/ecoli_matrices

E-mail address for corrections and feedback: krobison@nucleus.harvard.edu



Helix-Turn-Helix Protein Families

Probe-Helix Protein Families

Beta-Ribbon Protein Families

Zinc-Finger Protein Families

Other and Unclassified Protein Families


Summaries, Tables & Statistics

Useful & Related Resources